DNA Binding Motif
| Accessions: | MA1118.1 (JASPAR 2024) |
| Names: | SIX1 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 11 |
| Consensus: | GwAACCTGAkm |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 96 43 859 110 G 02 400 77 90 541 w 03 1049 18 6 35 A 04 1076 8 10 14 A 05 43 959 12 94 C 06 112 871 31 94 C 07 51 46 30 981 T 08 48 9 1025 26 G 09 1070 7 11 20 A 10 146 179 289 494 k 11 546 360 73 129 m |
| Type: | Heterodimer |
| Binding TFs: | Q15475 (Homeobox domain, Homeobox KN domain) Q15475 |
| Binding Sites: | MA1118.1.1 MA1118.1.10 MA1118.1.11 MA1118.1.12 MA1118.1.13 MA1118.1.14 MA1118.1.15 MA1118.1.16 MA1118.1.17 MA1118.1.18 MA1118.1.19 MA1118.1.2 MA1118.1.20 / MA1118.1.3 MA1118.1.4 MA1118.1.5 MA1118.1.6 MA1118.1.7 MA1118.1.8 MA1118.1.9 |
| Publications: | Spitz F., Demignon J., Porteu A., Kahn A., Concordet J. P., Daegelen D., Maire P. Expression of myogenin during embryogenesis is controlled by Six/sine oculis homeoproteins through a conserved MEF3 binding site.. Proc. Natl. Acad. Sci. USA 95:14220-14225 (1998). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.