DNA Binding Motif

Accessions: 1h88_B (3D-footprint 20231221)
Names: CCAAT/ENHANCER BINDING PROTEIN BETA
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX1
Length: 5
Consensus: rTGGC
Weblogo:
PSSM: P0 A C G T
01 27 13 44 12 r
02 6 4 4 82 T
03 5 6 80 5 G
04 3 2 89 2 G
05 11 70 8 7 C
Binding TFs: 1h88_B (bZIP transcription factor, Basic region leucine zipper)
Binding Sites: 1h88_D
1h88_E
Publications: Tahirov T.H, Sato K, Ichikawa-Iwata E, Sasaki M, Inoue-Bungo T, Shiina M, Kimura K, Takata S, Fujikawa A, Morii H, Kumasaka T, Yamamoto M, Ishii S, Ogata K. Mechanism of c-Myb-C/EBP beta cooperation from separated sites on a promoter. Cell 108:57-70 (2002). [Pubmed]

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