footprintDB - a database of transcription factors with annotated cis elements (DNA motifs and sites) and binding interfaces

DNA Binding Motif

Accessions:	Fur (RegulonDB 7.5)
Names:	Fur
Organisms:	ECK12
Libraries:	RegulonDB 7.5 ¹ ¹ Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed]
Length:	18
Consensus:	AATGAkAAtgATTwtyAw
Weblogo:
PSSM:	P0 A C G T 01 44 1 2 0 A 02 37 0 5 5 A 03 2 5 0 40 T 04 5 2 37 3 G 05 38 4 2 3 A 06 7 0 14 26 k 07 40 1 1 5 A 08 36 4 1 6 A 09 4 8 7 28 t 10 6 9 23 9 g 11 41 1 5 0 A 12 1 4 2 40 T 13 8 0 0 39 T 14 26 4 3 14 w 15 3 10 5 29 t 16 4 27 1 15 y 17 33 4 5 5 A 18 14 7 1 25 w
Binding TFs:	ECK120004828 (Ferric uptake regulator family)
Binding Sites:	ECK120011181 ECK120011184 ECK120011521 ECK120011523 ECK120011525 ECK120011527 ECK120011529 ECK120011535 ECK120011539 ECK120011696 ECK120011699 ECK120011701 ECK120011737 ECK120012032 ECK120012385 ECK120012392 ECK120012394 ECK120012396 ECK120012398 ECK120012400 ECK120012656 ECK120012659 ECK120012886 ECK120012888 ECK120013121 ECK120013124 ECK120013127 ECK120013496 ECK120013537 ECK120015641 ECK120015643 ECK120015645 ECK120015647 ECK120016006 ECK120016008 ECK120016010 ECK120016012 ECK120016014 ECK120016018 ECK120016032 ECK120016036 ECK120016058 ECK120016143 ECK120016484 ECK120016496 ECK120017054 ECK120023166 ECK120030708 ECK120030710 ECK120030712 ECK120030715 ECK120030740 ECK120033085 ECK120033347 ECK120033348 ECK120033921 ECK120033925 ECK120033927 ECK120033930 ECK120033932 ECK120033934 ECK120033936 ECK120033938 ECK120033940 ECK120033943 ECK120033945 ECK120033947 ECK125108650 ECK125108654 ECK125108656 ECK125108658 ECK125110197 ECK125110199 ECK125110201 ECK125110203 ECK125110205 ECK125110207 ECK125110243 ECK125110245 ECK125110260 ECK125134861 ECK125134863 ECK125134865 ECK125140761

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.

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