DNA Binding Motif

Accessions: 3ket_A (3D-footprint 20231221)
Names: Redox-sensing transcriptional repressor rex
Organisms: strain NEM316, Streptococcus agalactiae serotype III
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of a Rex-family transcriptional regulatory protein from Streptococcus agalactiae bound to a palindromic operator
Length: 8
Consensus: tTTCACAA
Weblogo:
PSSM: P0 A C G T
01 16 7 14 59 t
02 7 9 14 66 T
03 1 0 7 88 T
04 0 96 0 0 C
05 73 7 7 9 A
06 0 96 0 0 C
07 96 0 0 0 A
08 88 0 0 8 A
Binding TFs: 3ket_A (CoA binding domain, Putative DNA-binding protein N-terminus)
Binding Sites: 3ket_B
3ket_C

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