DNA Binding Motif

Accessions: 1mj2_B (3D-footprint 20231221)
Names: PROTEIN (METHIONINE REPRESSOR)
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: METHIONINE REPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO A CONSENSUS OPERATOR SEQUENCE
Length: 6
Consensus: mGnnkT
Weblogo:
PSSM: P0 A C G T
01 48 24 12 12 m
02 0 0 96 0 G
03 24 24 24 24 n
04 24 24 24 24 n
05 0 12 60 24 k
06 0 12 0 84 T
Binding TFs: 1mj2_B (Met Apo-repressor, MetJ)
Binding Sites: 1mj2_F / 1mj2_G
Publications: Garvie C.W, Phillips S.E. Direct and indirect readout in mutant Met repressor-operator complexes. Structure (London, England : 1993) 8:905-14 (2000). [Pubmed]

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