DNA Binding Motif

						

			
Accessions: 6l6l_AB (3D-footprint 20231221)

			
Names: Nuclear receptor related 1
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structural basis of NR4A2 homodimers binding to selective Nur-responsive elements
Length: 18
Consensus: AGGnCAnnnnnTGACCnA
Weblogo: 
PSSM: P0      A      C      G      T
01     78      6      6      6      A
02      0      0     96      0      G
03      0      0     96      0      G
04     24     24     24     24      n
05      0     96      0      0      C
06     78      6      6      6      A
07     24     24     24     24      n
08     24     24     24     24      n
09     24     24     24     24      n
10     24     24     24     24      n
11     24     24     24     24      n
12      6      6      6     78      T
13      0      0     96      0      G
14     78      6      6      6      A
15      0     96      0      0      C
16      0     96      0      0      C
17     24     24     24     24      n
18     78      6      6      6      A
Type: Heterodimer
Binding TFs: 6l6l_A (Zinc finger, C4 type (two domains))
6l6l_B (Zinc finger, C4 type (two domains))
Binding Sites: 6l6l_C
6l6l_D
			
Publications: Jiang L, Dai S, Li J, Liang X, Qu L, Chen X, Guo M, Chen Z, Chen L, Wei H, Chen Y. Structural basis of binding of homodimers of the nuclear receptor NR4A2 to selective Nur-responsive DNA elements. J Biol Chem 294:19795-19803 (2019). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.