DNA Binding Motif

Accessions: 3g9j_B (3D-footprint 20231221)
Names: Glucocorticoid receptor
Organisms: Rattus norvegicus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: GR DNA binding domain:Pal, 18bp complex-36
Length: 7
Consensus: TGTnCtg
Weblogo:
PSSM: P0 A C G T
01 11 0 9 76 T
02 0 0 96 0 G
03 0 0 0 96 T
04 24 24 24 24 n
05 0 96 0 0 C
06 19 9 11 57 t
07 19 9 57 11 g
Binding TFs: 3g9j_B (Zinc finger, C4 type (two domains))
Binding Sites: 3g9j_C
3g9j_D
Publications: Meijsing S.H, Pufall M.A, So A.Y, Bates D.L, Chen L, Yamamoto K.R. DNA binding site sequence directs glucocorticoid receptor structure and activity. Science (New York, N.Y.) 324:407-10 (2009). [Pubmed]

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