DNA Binding Motif

Accessions: MA0671.1 (JASPAR 2024)
Names: NFIX
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 9
Consensus: sgtGCCArv
Weblogo:
PSSM: P0 A C G T
01 7951 8810 8725 7378 s
02 7832 6134 10855 8043 g
03 11279 9695 5911 32864 t
04 132 186 32864 2539 G
05 3 32864 3257 29 C
06 0 32864 0 0 C
07 32864 2230 180 110 A
08 32864 1356 12688 2399 r
09 8251 9039 9135 6439 v
Type: Heterodimer
Binding TFs: Q14938 (CTF/NF-I family transcription modulation region, MH1 domain, Nuclear factor I protein pre-N-terminus)
Q14938
Publications: Messina G, Biressi S, Monteverde S, Magli A, Cassano M, Perani L, Roncaglia E, Tagliafico E, Starnes L, Campbell CE, Grossi M, Goldhamer DJ, Gronostajski RM, Cossu G. Nfix regulates fetal-specific transcription in developing skeletal muscle. Cell 140:554-66 (2010). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.