DNA Binding Motif

						

			
Accessions: BARHL2_DBD_1 (HumanTF 1.0)

			
Names: BARHL2
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 2
Length: 10
Consensus: vhTAAAyGgt
Weblogo: 
PSSM: P0      A      C      G      T
01    955    895   1091    612      v
02   1036    958    446   1113      h
03    337      0      0   3553      T
04   3553     57     30    605      A
05   3553      0      0    110      A
06   3553     67    391   1209      A
07      0   3553     40   2406      y
08    606      0   3553    309      G
09    860    647   1198    848      g
10    696    776    479   1603      t
Binding TFs: BARHL2_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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