DNA Binding Motif
| Accessions: | FhlA (RegulonDB 7.5) |
| Names: | FhlA, FhlA transcriptional activator |
| Organisms: | ECK12 |
| Libraries: | RegulonDB 7.5 1 1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed] |
| Length: | 14 |
| Consensus: | YGKCRAmAmkGmcr |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0 5 0 2 Y 02 0 1 5 1 G 03 0 0 2 5 K 04 0 7 0 0 C 05 2 0 5 0 R 06 6 0 0 1 A 07 4 2 1 0 m 08 7 0 0 0 A 09 2 4 0 1 m 10 1 0 3 3 k 11 1 0 6 0 G 12 3 3 1 0 m 13 1 4 1 1 c 14 4 1 2 0 r |
| Binding TFs: | ECK120004771 (ATPase family associated with various cellular activities (AAA), Sigma-54 interaction domain, GAF domain, Bacterial regulatory protein, Fis family, AAA domain (dynein-related subfamily), GAF domain, GAF domain) |
| Binding Sites: | ECK120011396 ECK120013095 ECK120013097 ECK120013099 ECK125109813 ECK125109814 ECK125109815 |
| Publications: | Skibinski DA., Golby P., Chang YS., Sargent F., Hoffman R., Harper R., Guest JR., Attwood MM., Berks BC., Andrews SC. Regulation of the hydrogenase-4 operon of Escherichia coli by the sigma(54)-dependent transcriptional activators FhlA and HyfR. J Bacteriol. 184(23):6642-53 (2002). [Pubmed] |
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