DNA Binding Motif

Accessions: 6ht5_E (3D-footprint 20231221)
Names: POU domain, class 5, transcription factor 1
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Oct4/Sox2:UTF1 structure
Length: 5
Consensus: tATgC
Weblogo:
PSSM: P0 A C G T
01 13 13 13 57 t
02 96 0 0 0 A
03 0 0 0 96 T
04 13 13 57 13 g
05 0 96 0 0 C
Binding TFs: 6ht5_E (Pou domain - N-terminal to homeobox domain)
Binding Sites: 6ht5_A
6ht5_B

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