DNA Binding Motif

						

			
Accessions: MA0482.1 (JASPAR 2024)

			
Names: Gata4
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 11
Consensus: yCTTATCTsyy
Weblogo: 
PSSM: P0      A      C      G      T
01     10   1039    374   1323      y
02      0   2165    306    275      C
03      0     89      0   2657      T
04      0      0      0   2746      T
05   2707     39      0      0      A
06      0      0      0   2746      T
07      0   2746      0      0      C
08    547      0      0   2199      T
09      0   1240    940    566      s
10    601   1004    157    984      y
11    386    929    682    749      y
Type: Heterodimer
Binding TFs: Q08369 (GATA zinc finger, GATA-type transcription activator, N-terminal )
Q08369
Binding Sites: MA0482.1.1
MA0482.1.10
MA0482.1.11
MA0482.1.12
MA0482.1.13
MA0482.1.14
MA0482.1.15
MA0482.1.16
MA0482.1.17
MA0482.1.18
MA0482.1.19
MA0482.1.2
MA0482.1.20
MA0482.1.3
MA0482.1.4
MA0482.1.5
MA0482.1.6
MA0482.1.7
MA0482.1.8
MA0482.1.9
			
Publications: Yamagata T, Nishida J, Sakai R, Tanaka T, Honda H, Hirano N, Mano H, Yazaki Y, Hirai H. Of the GATA-binding proteins, only GATA-4 selectively regulates the human interleukin-5 gene promoter in interleukin-5-producing cells which express multiple GATA-binding proteins. Molecular and cellular biology 15:3830-9 (1995). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.