DNA Binding Motif
| Accessions: | 2z33_A (3D-footprint 20231221) |
| Names: | Phosphate regulon transcriptional regulatory protein phoB |
| Organisms: | Escherichia coli, strain K12 |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | Solution structure of the DNA complex of PhoB DNA-binding/transactivation Domain |
| Length: | 7 |
| Consensus: | TGTcnnA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0 0 0 96 T 02 0 0 96 0 G 03 0 0 0 96 T 04 19 38 20 19 c 05 24 24 24 24 n 06 24 24 24 24 n 07 76 0 19 1 A |
| Binding TFs: | 2z33_A (Transcriptional regulatory protein, C terminal) |
| Binding Sites: | 2z33_B 2z33_C |
| Publications: | Yamane T, Okamura H, Ikeguchi M, Nishimura Y, Kidera A. Water-mediated interactions between DNA and PhoB DNA-binding/transactivation domain: NMR-restrained molecular dynamics in explicit water environment. Proteins 71:1970-83 (2008). [Pubmed] |
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