DNA Binding Motif
Accessions: | ArgR (RegulonDB 7.5) |
Names: | ArgR |
Organisms: | ECK12 |
Libraries: | RegulonDB 7.5 1 1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed] |
Length: | 18 |
Consensus: | hwArTGAATwwThATkCA |
Weblogo: | |
PSSM: | P0 A C G T 01 8 7 3 9 h 02 12 4 2 9 w 03 21 1 1 4 A 04 9 6 8 4 r 05 4 2 2 19 T 06 2 3 21 1 G 07 21 3 2 1 A 08 21 3 2 1 A 09 3 1 0 23 T 10 10 0 1 16 w 11 8 2 0 17 w 12 5 0 1 21 T 13 7 7 0 13 h 14 25 0 1 1 A 15 4 3 0 20 T 16 2 3 15 7 k 17 2 24 0 1 C 18 25 0 2 0 A |
Binding TFs: | ECK120004542 (Arginine repressor, DNA binding domain, Arginine repressor, C-terminal domain) |
Binding Sites: | ECK120011673 ECK120011675 ECK120011677 ECK120011679 ECK120012260 ECK120012263 ECK120012266 ECK120012608 ECK120012611 ECK120012614 ECK120012616 ECK120012618 ECK120012620 ECK120012622 ECK120012624 ECK120012652 ECK120012654 ECK120020708 ECK120020769 ECK120029619 ECK120029620 ECK120032395 ECK120032397 ECK120033152 ECK120033342 ECK120033343 ECK120033344 |
Publications: | Kiupakis AK., Reitzer L. ArgR-independent induction and ArgR-dependent superinduction of the astCADBE operon in Escherichia coli. J Bacteriol. 184(11):2940-50 (2002). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.