DNA Binding Motif

						

			
Accessions: M0411 (AthalianaCistrome v4_May2016)

			
Names: LMI1.ampDAP, T25843;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 13
Consensus: TCAATTATTGktt
Weblogo: 
PSSM: P0      A      C      G      T
01     92     12     57    437      T
02     15    492     66     25      C
03    501     63      0     34      A
04    598      0      0      0      A
05      0      0      0    598      T
06      6      0      0    592      T
07    598      0      0      0      A
08      0      0      0    598      T
09      0      0      0    598      T
10     51      0    515     32      G
11    138     98    211    151      k
12    128     97     36    337      t
13    147     90    117    244      t
Binding TFs: T25843 (Homeobox domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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