DNA Binding Motif
| Accessions: | DeoR (RegulonDB 7.5) |
| Names: | DeoR, DeoR DNA-binding transcriptional repressor |
| Organisms: | ECK12 |
| Libraries: | RegulonDB 7.5 1 1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed] |
| Length: | 11 |
| Consensus: | TkCThACAkmw |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0 0 0 7 T 02 1 0 2 4 k 03 0 6 0 1 C 04 1 1 0 5 T 05 2 3 0 2 h 06 6 1 0 0 A 07 0 7 0 0 C 08 7 0 0 0 A 09 1 1 3 2 k 10 2 4 0 1 m 11 4 0 1 2 w |
| Binding TFs: | ECK120004693 (DeoR C terminal sensor domain, DeoR-like helix-turn-helix domain) |
| Binding Sites: | ECK120012666 ECK120012668 ECK120012670 ECK120012677 ECK120012679 ECK120012681 ECK120013435 |
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