DNA Binding Motif

Accessions: 1ea4_K (3D-footprint 2022-04-03)
Names: TRANSCRIPTIONAL REPRESSOR COPG
Organisms: Streptococcus agalactiae
Libraries: 3D-footprint 2022-04-03 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: TRANSCRIPTIONAL REPRESSOR COPG/22bp dsDNA COMPLEX
Length: 4
Consensus: TGCA
Weblogo:
PSSM: P0 A C G T
01 9 11 9 67 T
02 9 9 67 11 G
03 11 67 9 9 C
04 96 0 0 0 A
Binding TFs: 1ea4_K (Ribbon-helix-helix protein, copG family)
Binding Sites: 1ea4_U
1ea4_V
Publications: Costa M, Solà M, del Solar G, Eritja R, Hernández-Arriaga A.M, Espinosa M, Gomis-Rüth F.X, Coll M. Plasmid transcriptional repressor CopG oligomerises to render helical superstructures unbound and in complexes with oligonucleotides. Journal of molecular biology 310:403-17 (2001). [Pubmed]

Disclaimer

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research.