DNA Binding Motif

Accessions: PF0113.1 (JASPAR 2018)
Names: AACYNNNNTTCCS
Libraries: JASPAR 2018 1
1 [Pubmed]
Notes: phylogenetic
Length: 13
Consensus: AACTaCatTTCCC
Weblogo:
PSSM: P0 A C G T
01 412 0 0 0 A
02 412 0 0 0 A
03 0 412 0 0 C
04 0 62 0 350 T
05 270 61 41 40 a
06 16 356 19 21 C
07 269 81 45 17 a
08 95 83 31 203 t
09 0 0 0 412 T
10 0 0 0 412 T
11 0 412 0 0 C
12 0 412 0 0 C
13 0 381 31 0 C
Binding Sites: PF0113.1.4 / PF0113.1.16 / PF0113.1.1 / PF0113.1.15 / PF0113.1.12
PF0113.1.10 / PF0113.1.14
PF0113.1.8 / PF0113.1.18 / PF0113.1.11
PF0113.1.13
PF0113.1.17
PF0113.1.19
PF0113.1.2
PF0113.1.20
PF0113.1.3
PF0113.1.5
PF0113.1.6
PF0113.1.7
PF0113.1.9
Publications: Xie X, Lu J, Kulbokas E.J, Golub T.R, Mootha V, Lindblad-Toh K, Lander E.S, Kellis M. Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals. Nature 434:338-45 (2005). [Pubmed]

Disclaimer

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research.