DNA Binding Motif
Accessions: | CsgD (RegulonDB 7.5) |
Names: | CsgD, CsgD DNA-binding transcriptional dual regulator |
Organisms: | ECK12 |
Libraries: | RegulonDB 7.5 1 1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed] |
Length: | 11 |
Consensus: | mgrrtrarhtA |
Weblogo: | |
PSSM: | P0 A C G T 01 6 10 1 4 m 02 5 4 8 4 g 03 12 0 9 0 r 04 9 0 12 0 r 05 3 2 3 13 t 06 7 0 14 0 r 07 13 1 3 4 a 08 8 2 10 1 r 09 6 6 0 9 h 10 2 4 2 13 t 11 21 0 0 0 A |
Binding TFs: | ECK120007601 (Bacterial regulatory proteins, luxR family) |
Binding Sites: | ECK120026340 ECK120026342 ECK120026344 ECK120026348 ECK125135159 ECK125135161 ECK125135163 ECK125135165 ECK125135171 ECK125135173 ECK125135175 ECK125135177 ECK125135179 ECK125135181 ECK125135183 ECK125135185 ECK125135187 ECK125135189 ECK125135214 ECK125135216 ECK125135252 |
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