DNA Binding Motif

						

			
Accessions: 5vpe_C (3D-footprint 20231221)

			
Names: Protein fosB
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Transcription factor FosB/JunD bZIP domain in complex with cognate DNA, type-I crystal
Length: 7
Consensus: aGTcACc
Weblogo: 
PSSM: P0      A      C      G      T
01     56     13     14     13      a
02      3      4     85      4      G
03      7      8      7     74      T
04     12     61     11     12      c
05     71      9      9      7      A
06     15     66      7      8      C
07     16     39     20     21      c
Binding TFs: 5vpe_C (bZIP transcription factor, Basic region leucine zipper)
Binding Sites: 5vpe_G
5vpe_H
			
Publications: Yin Z, Machius M, Nestler EJ, Rudenko G. Activator Protein-1: redox switch controlling structure and DNA-binding. Nucleic Acids Res 45:11425-11436 (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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