DNA Binding Motif

						

			
Accessions: MA0966.1 (JASPAR 2024)

			
Names: BIM3
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 10
Consensus: rgCACGTGcy
Weblogo: 
PSSM: P0      A      C      G      T
01    294    203    270    233      r
02    159    165    433    243      g
03     74    821      8     96      C
04    942      0     25     33      A
05     15    918      0     67      C
06     67      0    918     15      G
07     33     25      0    942      T
08     96      8    821     74      G
09    243    433    165    159      c
10    233    270    203    294      y
Type: Heterodimer
Binding TFs: Q9FMB6 (Helix-loop-helix DNA-binding domain)
Q9FMB6
			
Publications: Yin Y, Vafeados D, Tao Y, Yoshida S, Asami T, Chory J. A new class of transcription factors mediates brassinosteroid-regulated gene expression in Arabidopsis. Cell 120:249-59 (2005). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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