DNA Binding Motif

Accessions: MA0966.1 (JASPAR 2018)
Names: BIM3
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2018 1
1 Khan A, Fornes O, Stigliani A, Gheorghe M, Castro-Mondragon JA, van der Lee R, Bessy A, Cheneby , Kulkarni SR, Tan G, Baranasic D, Arenillas DJ, Sandelin A, Vandepoele K, Lenhard B, Ballester B, Wasserman WW, Parcy F, Mathelier A (2017) JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework. Nucleic Acids Res. doi: 10.1093/nar/gkx1126 [Pubmed]
Notes: PBM
Length: 10
Consensus: rgCACGTGcy
Weblogo:
PSSM: P0 A C G T
01 294 203 270 233 r
02 159 165 433 243 g
03 74 821 8 96 C
04 942 0 25 33 A
05 15 918 0 67 C
06 67 0 918 15 G
07 33 25 0 942 T
08 96 8 821 74 G
09 243 433 165 159 c
10 233 270 203 294 y
Binding TFs: Q9FMB6 (Helix-loop-helix DNA-binding domain)
Publications: Yin Y, Vafeados D, Tao Y, Yoshida S, Asami T, Chory J. A new class of transcription factors mediates brassinosteroid-regulated gene expression in Arabidopsis. Cell 120:249-59 (2005). [Pubmed]

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