DNA Binding Motif

Accessions: 4gzn_C (3D-footprint 20231221)
Names: Zinc finger protein 57
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Mouse ZFP57 zinc fingers in complex with methylated DNA
Length: 7
Consensus: TGCGGCA
Weblogo:
PSSM: P0 A C G T
01 7 9 7 73 T
02 0 0 96 0 G
03 9 73 7 7 C
04 7 7 75 7 G
05 0 0 96 0 G
06 0 96 0 0 C
07 73 7 9 7 A
Binding TFs: 4gzn_C (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Binding Sites: 4gzn_A
4gzn_B
Publications: Liu Y, Toh H, Sasaki H, Zhang X, Cheng X. An atomic model of Zfp57 recognition of CpG methylation within a specific DNA sequence. Genes & development 26:2374-9 (2012). [Pubmed]

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