DNA Binding Motif

Accessions: 4auw_AB (3D-footprint 20231221)
Names: TRANSCRIPTION FACTOR MAFB
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: CRYSTAL STRUCTURE OF THE BZIP HOMODIMERIC MAFB IN COMPLEX WITH THE C- MARE BINDING SITE
Length: 14
Consensus: TGCtnACGTnarCA
Weblogo:
PSSM: P0 A C G T
01 0 0 0 96 T
02 0 0 96 0 G
03 0 96 0 0 C
04 18 18 18 42 t
05 24 24 24 24 n
06 96 0 0 0 A
07 0 96 0 0 C
08 0 0 96 0 G
09 0 0 0 96 T
10 24 24 24 24 n
11 42 18 18 18 a
12 24 6 60 6 r
13 0 96 0 0 C
14 96 0 0 0 A
Type: Heterodimer
Binding TFs: 4auw_A (bZIP transcription factor, bZIP Maf transcription factor)
4auw_B (bZIP transcription factor, bZIP Maf transcription factor)
Binding Sites: 4auw_C
4auw_D
Publications: Textor LC, Wilmanns M, Holton SJ. Expression, purification, crystallization and preliminary crystallographic analysis of the mouse transcription factor MafB in complex with its DNA-recognition motif Cmare. Acta Crystallogr Sect F Struct Biol Cryst Commun : (2007). [Pubmed]

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