DNA Binding Motif

						

			
Accessions: mirr (DrosophilaTF 1.1)

			
Names: mirr
Libraries: DrosophilaTF 1.1 1
1 Down T.A, Bergman C.M, Su J, Hubbard T.J. Large-scale discovery of promoter motifs in Drosophila melanogaster. PLoS computational biology 3:e7 (2007). [Pubmed]
Length: 15
Consensus: rwwwaCwygtstwma
Weblogo: 
PSSM: P0      A      C      G      T
01 0.3636 0.1429 0.3636 0.1299      r
02 0.4935 0.1169 0.0779 0.3117      w
03 0.5065      0      0 0.4935      w
04 0.5584 0.0519 0.1169 0.2727      w
05 0.6364 0.0779 0.1429 0.1429      a
06  0.013 0.8052 0.1818      0      C
07 0.5844 0.0519  0.039 0.3247      w
08  0.039 0.3896 0.2468 0.3247      y
09 0.2468      0 0.5584 0.1948      g
10 0.1039 0.2208 0.0909 0.5844      t
11 0.1299 0.2987 0.5714      0      s
12 0.1429 0.0779 0.1688 0.6104      t
13 0.3117 0.1688 0.1818 0.3377      w
14 0.4286 0.3377 0.1299 0.1039      m
15 0.5065 0.1429 0.1169 0.2338      a
Binding TFs: mirr
			
Publications: Bilioni A, Craig G, Hill C, McNeill H. Iroquois transcription factors recognize a unique motif to mediate transcriptional repression in vivo. Proceedings of the National Academy of Sciences of the United States of America 102:14671-6 (2005). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.