DNA Binding Motif

Accessions: 3cro_LR (3D-footprint 20231221)
Names: PROTEIN (434 CRO)
Organisms: Phage 434
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: THE PHAGE 434 CRO/OR1 COMPLEX AT 2.5 ANGSTROMS RESOLUTION
Length: 16
Consensus: TAMwAnnnnnnkTGTA
Weblogo:
PSSM: P0 A C G T
01 0 0 0 96 T
02 96 0 0 0 A
03 66 30 0 0 M
04 42 12 18 24 w
05 96 0 0 0 A
06 24 24 24 24 n
07 24 24 24 24 n
08 24 24 24 24 n
09 24 24 24 24 n
10 24 24 24 24 n
11 24 24 24 24 n
12 18 18 24 36 k
13 0 0 0 96 T
14 6 0 90 0 G
15 0 0 0 96 T
16 96 0 0 0 A
Type: Heterodimer
Binding TFs: 3cro_L (Helix-turn-helix, Helix-turn-helix domain, Helix-turn-helix domain)
3cro_R (Helix-turn-helix, Helix-turn-helix domain, Helix-turn-helix domain)
Binding Sites: 3cro_A
3cro_B
Publications: Mondragón A, Harrison S.C. The phage 434 Cro/OR1 complex at 2.5 A resolution. Journal of molecular biology 219:321-34 (1991). [Pubmed]

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