DNA Binding Motif
| Accessions: | 1apl_D (3D-footprint 20231221) |
| Names: | PROTEIN (MAT-ALPHA2 HOMEODOMAIN) |
| Organisms: | Saccharomyces cerevisiae, Saccharomyces cerevisiae (strain ATCC 204508 / S288c) |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | CRYSTAL STRUCTURE OF A MAT-ALPHA2 HOMEODOMAIN-OPERATOR COMPLEX SUGGESTS A GENERAL MODEL FOR HOMEODOMAIN-DNA INTERACTIONS |
| Length: | 7 |
| Consensus: | TGTanTt |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0 0 0 96 T 02 0 0 96 0 G 03 0 0 0 96 T 04 54 13 13 16 a 05 24 24 24 24 n 06 0 0 0 96 T 07 16 13 13 54 t |
| Binding TFs: | 1apl_D (Homeobox domain, Homeobox KN domain) |
| Binding Sites: | 1apl_A 1apl_B |
| Publications: | Wolberger C., Vershon A. K., Liu B., Johnson A. D., Pabo C. O. Crystal structure of a MATalpha2 homeodomain-operator complex suggests a general model for homeodomain-DNA interactions. Cell 67:517-528 (1991). [Pubmed] |
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