DNA Binding Motif

Accessions: CG10267_SOLEXA_5_FBgn0037446 (FlyZincFinger 1.0 )
Names: CG10267
Organisms: Drosophila melanogaster
Libraries: FlyZincFinger 1.0 1
1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]
Length: 20
Consensus: cakcwwayAACACTAsmmwt
Weblogo:
PSSM: P0 A C G T
01 15 101 17 30 c
02 76 48 40 41 a
03 55 58 83 73 k
04 55 132 29 53 c
05 92 41 28 108 w
06 157 11 31 70 w
07 149 67 4 49 a
08 10 157 2 100 y
09 264 0 1 4 A
10 223 29 0 17 A
11 35 212 7 15 C
12 222 44 1 2 A
13 26 243 0 0 C
14 4 1 0 264 T
15 208 0 60 1 A
16 23 117 107 22 s
17 92 94 43 40 m
18 133 71 20 45 m
19 85 45 36 103 w
20 40 57 40 129 t
Binding TFs: CG10267 (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Publications: Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]

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