DNA Binding Motif

						

			
Accessions: MA1026.1 (JASPAR 2024)

			
Names: ATHB-15
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 8
Consensus: tAATdATT
Weblogo: 
PSSM: P0      A      C      G      T
01     93    172     60    675      t
02    722    193     57     28      A
03    926     32     15     26      A
04     46     10     16    928      T
05    274     62    282    381      d
06    928     16     10     46      A
07     26     15     32    926      T
08     28     57    193    722      T
Type: Heterodimer
Binding TFs: Q9ZU11 (Homeobox domain, START domain, MEKHLA domain)
Q9ZU11
			
Publications: Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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