DNA Binding Motif

Accessions: MA0931.1 (JASPAR 2018)
Names: ABI5
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2018 1
1 [Pubmed]
Notes: PBM
Length: 10
Consensus: bgmCACGTGk
Weblogo:
PSSM: P0 A C G T
01 181 257 257 306 b
02 87 87 660 167 g
03 608 314 0 78 m
04 0 922 78 0 C
05 999 0 0 0 A
06 0 999 0 0 C
07 0 0 999 0 G
08 0 0 0 999 T
09 152 70 709 70 G
10 164 164 337 336 k
Binding TFs: Q9SJN0 (Basic region leucine zipper, bZIP transcription factor)
Binding Sites: MA0931.1.1
MA0931.1.10
MA0931.1.11
MA0931.1.12
MA0931.1.13
MA0931.1.14
MA0931.1.15
MA0931.1.16
MA0931.1.17
MA0931.1.18
MA0931.1.19
MA0931.1.2
MA0931.1.20
MA0931.1.3
MA0931.1.4
MA0931.1.5
MA0931.1.6
MA0931.1.7
MA0931.1.8
MA0931.1.9
Publications: Kim S. Y., Ma J., Perret P., Li Z., Thomas T. L. Arabidopsis ABI5 subfamily members have distinct DNA-binding and transcriptional activities.. Plant Physiol. 130:688-697 (2002). [Pubmed]

Disclaimer

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