DNA Binding Motif

Accessions: CG11071_SOLEXA_FBgn0030532 (FlyZincFinger 1.0 )
Names: CG11071
Organisms: Drosophila melanogaster
Libraries: FlyZincFinger 1.0 1
1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]
Length: 15
Consensus: mymaGCCTAtagmcm
Weblogo:
PSSM: P0 A C G T
01 748 1116 574 505 m
02 699 962 411 870 y
03 1138 1117 637 53 m
04 1399 639 648 257 a
05 23 37 2869 14 G
06 30 2889 5 19 C
07 28 2887 19 10 C
08 25 164 37 2717 T
09 2647 270 14 12 A
10 332 674 137 1799 t
11 1328 485 479 651 a
12 184 438 1783 538 g
13 1167 1281 229 266 m
14 675 1314 411 542 c
15 985 915 432 611 m
Binding TFs: CG11071 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Publications: Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]

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