DNA Binding Motif

Accessions: MA0993.1 (JASPAR 2024)
Names: ERF7
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 10
Consensus: mGCCGycaww
Weblogo:
PSSM: P0 A C G T
01 263 442 140 156 m
02 77 14 874 35 G
03 48 868 84 0 C
04 129 770 36 65 C
05 90 25 875 10 G
06 146 456 132 266 y
07 212 593 66 128 c
08 419 174 210 198 a
09 276 208 198 317 w
10 279 209 201 312 w
Type: Heterodimer
Binding TFs: Q9LDE4 (AP2 domain)
Q9LDE4
Binding Sites: MA0993.1.1
MA0993.1.10
MA0993.1.11
MA0993.1.12
MA0993.1.13
MA0993.1.14
MA0993.1.15
MA0993.1.16
MA0993.1.17
MA0993.1.18
MA0993.1.19
MA0993.1.2
MA0993.1.20
MA0993.1.3
MA0993.1.4
MA0993.1.5
MA0993.1.6
MA0993.1.7
MA0993.1.8
MA0993.1.9
Publications: Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.