DNA Binding Motif

						

			
Accessions: MA0088.1 (JASPAR 2024)

			
Names: znf143
Organisms: Xenopus laevis
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: COMPILED
Length: 20
Consensus: bayyTCCCAkmaTkCmwyGm
Weblogo: 
PSSM: P0      A      C      G      T
01      0      3      4      3      b
02      6      2      1      1      a
03      2      3      1      4      y
04      0      3      2      5      y
05      2      1      0      7      T
06      1      7      0      2      C
07      0     10      0      0      C
08      0     10      0      0      C
09      9      1      0      0      A
10      0      1      4      5      k
11      4      4      2      0      m
12      6      2      2      0      a
13      0      0      1      9      T
14      0      1      6      3      k
15      0     10      0      0      C
16      4      5      0      1      m
17      3      1      1      5      w
18      2      3      0      5      y
19      1      1      7      1      G
20      3      6      1      0      m
Type: Heterodimer
Binding TFs: Q91853 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Q91853
Binding Sites: MA0088.1.1
MA0088.1.10
MA0088.1.2
MA0088.1.3
MA0088.1.4
MA0088.1.5
MA0088.1.6
MA0088.1.7
MA0088.1.8
MA0088.1.9
			
Publications: Schaub M., Myslinski E., Schuster C., Krol A., Carbon P. Staf, a promiscuous activator for enhanced transcription by RNA polymerases II and IIII. EMBO J. 16:173-181 (1997). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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