DNA Binding Motif

						

			
Accessions: MA0533.1 (JASPAR 2024)

			
Names: su(Hw)
Organisms: Drosophila melanogaster
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-chip
Length: 21
Consensus: gCcyaAAAGTATGCwAyrmww
Weblogo: 
PSSM: P0      A      C      G      T
01    336   1133   2808    460      g
02    243   4116     35    343      C
03    778   3001    231    727      c
04    855   1480    977   1425      y
05   2767    586    925    459      a
06   3438    208    529    562      A
07   4217     93    295    132      A
08   3904     19    316    498      A
09    410    235   3759    333      G
10     17    441     96   4183      T
11   4276     21     95    345      A
12      7     11   1140   3579      T
13    199      5   4526      7      G
14    116   4594      6     21      C
15   2821    411      8   1497      w
16   3392    296    713    336      A
17    523   2430    191   1593      y
18   2535    354   1409    439      r
19   1815   1284    770    868      m
20   2231    447    345   1714      w
21   1996    379    351   2011      w
Type: Heterodimer
Binding TFs: P08970 (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
P08970
Binding Sites: MA0533.1.1
MA0533.1.10
MA0533.1.11 / MA0533.1.12
MA0533.1.13
MA0533.1.14
MA0533.1.15
MA0533.1.16
MA0533.1.17
MA0533.1.18
MA0533.1.19
MA0533.1.2
MA0533.1.20
MA0533.1.3
MA0533.1.4
MA0533.1.5
MA0533.1.6
MA0533.1.7
MA0533.1.8
MA0533.1.9
			
Publications: Adryan B, Woerfel G, Birch-Machin I, Gao S, Quick M, Meadows L, Russell S, White R. Genomic mapping of Suppressor of Hairy-wing binding sites in Drosophila. Genome biology 8:R167 (2007). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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