DNA Binding Motif

Accessions: 2e42_AB (3D-footprint 20231221)
Names: CCAAT/enhancer-binding protein beta
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of C/EBPbeta Bzip homodimer V285A mutant bound to A High Affinity DNA fragment
Length: 9
Consensus: gTTGCGCAA
Weblogo:
PSSM: P0 A C G T
01 20 19 38 19 g
02 0 0 0 96 T
03 0 0 0 96 T
04 0 0 76 20 G
05 0 96 0 0 C
06 0 0 96 0 G
07 0 96 0 0 C
08 96 0 0 0 A
09 96 0 0 0 A
Type: Heterodimer
Binding TFs: 2e42_A (bZIP transcription factor, Basic region leucine zipper)
2e42_B (bZIP transcription factor, Basic region leucine zipper)
Binding Sites: 2e42_C
2e42_D

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