DNA Binding Motif

Accessions: 1jfs_A (3D-footprint 20231221)
Names: PURINE NUCLEOTIDE SYNTHESIS REPRESSOR
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: PURINE REPRESSOR MUTANT-HYPOXANTHINE-PURF OPERATOR COMPLEX
Length: 8
Consensus: CGcanACg
Weblogo:
PSSM: P0 A C G T
01 0 96 0 0 C
02 0 0 96 0 G
03 12 60 12 12 c
04 31 21 21 23 a
05 24 24 24 24 n
06 81 4 7 4 A
07 2 90 2 2 C
08 16 16 45 19 g
Binding TFs: 1jfs_A (Bacterial regulatory proteins, lacI family, Periplasmic binding proteins and sugar binding domain of LacI family, Periplasmic binding protein-like domain, Periplasmic binding protein domain)
Binding Sites: 1jfs_B
Publications: Huffman J.L, Lu F, Zalkin H, Brennan R.G. Role of residue 147 in the gene regulatory function of the Escherichia coli purine repressor. Biochemistry 41:511-20 (2002). [Pubmed]

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