DNA Binding Motif

Accessions: 1tqe_RS (3D-footprint 2022-04-03)
Names: Myocyte-specific enhancer factor 2B
Organisms: Homo sapiens
Libraries: 3D-footprint 2022-04-03 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2
Length: 10
Consensus: CTnnnnntAa
Weblogo:
PSSM: P0 A C G T
01 0 96 0 0 C
02 0 0 0 96 T
03 24 24 24 24 n
04 24 24 24 24 n
05 24 24 24 24 n
06 24 24 24 24 n
07 24 24 24 24 n
08 13 13 13 57 t
09 96 0 0 0 A
10 57 13 13 13 a
Binding TFs: 1tqe_R / 1tqe_S (SRF-type transcription factor (DNA-binding and dimerisation domain))
Binding Sites: 1tqe_E
1tqe_F
Publications: Han A, He J, Wu Y, Liu J.O, Chen L. Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2. Journal of molecular biology 345:91-102 (2005). [Pubmed]

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