DNA Binding Motif
| Accessions: | 6g1l_A (3D-footprint 20231221) |
| Names: | Microphthalmia-associated transcription factor |
| Organisms: | Mus musculus |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | MITF/CLEARbox structure |
| Length: | 5 |
| Consensus: | CgTGa |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0 96 0 0 C 02 16 13 54 13 g 03 0 0 0 96 T 04 0 0 96 0 G 05 54 13 16 13 a |
| Binding TFs: | 6g1l_A (Helix-loop-helix DNA-binding domain) |
| Binding Sites: | 6g1l_B |
| Publications: | Möller K, Sigurbjornsdottir S, Arnthorsson AO, Pogenberg V, Dilshat R, Fock V, Brynjolfsdottir SH, Bindesboll C, Bessadottir M, Ogmundsdottir HM, Simonsen A, Larue L, Wilmanns M, Thorsson V, Steingrimsson E, Ogmundsdottir MH. MITF has a central role in regulating starvation-induced autophagy in melanoma. Sci Rep 9:1055 (2019). [Pubmed] |
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