DNA Binding Motif

						

			
Accessions: MA1150.1 (JASPAR 2024)

			
Names: RORB
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: SMiLE-seq
Length: 11
Consensus: AwttrGGTCAy
Weblogo: 
PSSM: P0      A      C      G      T
01    785     14     29    172      A
02    526     26     24    425      w
03    233    162    201    403      t
04     53    165    235    547      t
05    602     14    358     26      r
06     16     25    907     52      G
07     32     13    928     27      G
08     28    146     50    776      T
09     47    781     17    155      C
10    896     15     63     26      A
11    205    326    145    324      y
Type: Heterodimer
Binding TFs: Q92753 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
Q92753
			
Publications: Zhang Y, Luo XY, Wu DH, Xu Y. ROR nuclear receptors: structures, related diseases, and drug discovery. Acta Pharmacol Sin 36:71-87 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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