DNA Binding Motif

						

			
Accessions: 6dfy_C (3D-footprint 20231221)

			
Names: Double homeobox protein 4
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Remodeled crystal structure of DNA-bound DUX4-HD2
Length: 6
Consensus: AGAnAA
Weblogo: 
PSSM: P0      A      C      G      T
01     67      9      9     11      A
02      0      0     96      0      G
03     96      0      0      0      A
04     24     24     24     24      n
05     67      9      9     11      A
06     67     11      9      9      A
Binding TFs: 6dfy_C (Homeobox domain, Homeobox KN domain)
Binding Sites: 6dfy_E
6dfy_F
			
Publications: Aihara H, Shi K, Lee JK, Bosnakovski D, Kyba M. Comment on structural basis of DUX4/IGH-driven transactivation. Leukemia 32:2090-2092 (2018). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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