DNA Binding Motif

Accessions: MA0297.1 (JASPAR 2018)
Names: FKH2
Organisms: Saccharomyces cerevisiae
Libraries: JASPAR 2018 1
1 Khan A, Fornes O, Stigliani A, Gheorghe M, Castro-Mondragon JA, van der Lee R, Bessy A, Cheneby , Kulkarni SR, Tan G, Baranasic D, Arenillas DJ, Sandelin A, Vandepoele K, Lenhard B, Ballester B, Wasserman WW, Parcy F, Mathelier A (2017) JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework. Nucleic Acids Res. doi: 10.1093/nar/gkx1126 [Pubmed]
Notes: PBM, CSA and/or DIP-chip
Length: 7
Consensus: GTAAACA
Weblogo:
PSSM: P0 A C G T
01 13 0 88 0 G
02 0 0 0 100 T
03 100 0 0 0 A
04 100 0 0 0 A
05 100 0 0 0 A
06 0 100 0 0 C
07 100 0 0 0 A
Binding TFs: P41813 (FHA domain, Fork head domain)
Publications: Badis G, Chan E.T, van Bakel H, Pena-Castillo L, Tillo D, Tsui K, Carlson C.D, Gossett A.J, Hasinoff M.J, Warren C.L, Gebbia M, Talukder S, Yang A, Mnaimneh S, Terterov D, Coburn D, Li Yeo A, Yeo Z.X, Clarke N.D, Lieb J.D, Ansari A.Z, Nislow C, Hughes T.R. A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters. Molecular cell 32:878-87 (2008). [Pubmed]

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