DNA Binding Motif

						

			
Accessions: MF0007.1 (JASPAR 2024)

			
Names: bHLH(zip) class
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: METAMODEL
Length: 8
Consensus: asCAcsTG
Weblogo: 
PSSM: P0      A      C      G      T
01 61.350 12.120 22.970  3.560      a
02 21.780 35.060 26.550 16.600      s
03  3.740 90.950  1.480  3.820      C
04 83.860  1.160  8.640  6.330      A
05  4.030 65.160 21.070  9.750      c
06  5.810 25.730 67.790  0.670      s
07  5.060  4.130  0.180 90.630      T
08  2.850      0 94.960  2.190      G
			
Publications: Sandelin A, Wasserman W.W. Constrained binding site diversity within families of transcription factors enhances pattern discovery bioinformatics. Journal of molecular biology 338:207-15 (2004). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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