DNA Binding Motif

Accessions: MA0917.1 (JASPAR 2024)
Names: gcm2
Organisms: Drosophila melanogaster
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 8
Consensus: ATGCGGGy
Weblogo:
PSSM: P0 A C G T
01 730 111 159 0 A
02 0 12 0 988 T
03 235 24 741 0 G
04 47 800 141 12 C
05 71 0 753 177 G
06 0 0 1000 0 G
07 0 0 1000 0 G
08 56 352 93 500 y
Type: Heterodimer
Binding TFs: Q9VLA2 (GCM motif protein)
Q9VLA2
Publications: Schreiber J, Enderich J, Wegner M. Structural requirements for DNA binding of GCM proteins. Nucleic Acids Res 26:2337-43 (1998). [Pubmed]

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