DNA Binding Motif

Accessions: 3w6v_A (3D-footprint 20210203)
Names: AdpA
Organisms: Streptomyces griseus
Libraries: 3D-footprint 20210203 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of the DNA-binding domain of AdpA, the global transcriptional factor, in complex with a target DNA
Length: 6
Consensus: cCGcCA
01 16 45 19 16 c
02 4 81 4 7 C
03 3 3 85 5 G
04 12 60 12 12 c
05 0 96 0 0 C
06 78 6 6 6 A
Binding TFs: 3w6v_A (Bacterial regulatory helix-turn-helix proteins, AraC family, Helix-turn-helix domain)
Binding Sites: 3w6v_B
Publications: Yao M.D, Ohtsuka J, Nagata K, Miyazono K, Zhi Y, Ohnishi Y, Tanokura M. Complex structure of the DNA-binding domain of AdpA, the global transcription factor in Streptomyces griseus, and a target duplex DNA reveals the structural basis of its tolerant DNA sequence specificity. The Journal of biological chemistry 288:31019-29 (2013). [Pubmed]


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research.