DNA Binding Motif

Accessions: MA1040.1 (JASPAR 2024)
Names: MYB46
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 8
Consensus: GkTAGGTr
Weblogo:
PSSM: P0 A C G T
01 81 3 911 5 G
02 3 2 387 608 k
03 6 7 1 985 T
04 836 30 6 128 A
05 4 4 991 2 G
06 5 3 898 95 G
07 2 33 1 964 T
08 580 24 358 38 r
Type: Heterodimer
Binding TFs: Q9LXV2 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
Q9LXV2
Publications: Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). [Pubmed]

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