DNA Binding Motif

						

			
Accessions: BARHL2_full_3 (HumanTF 1.0)

			
Names: BARHL2
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 4
Length: 16
Consensus: TAAwyGbysyTAAwyG
Weblogo: 
PSSM: P0      A      C      G      T
01    856    285    130  17113      T
02  17113     89    335    891      A
03  17113     98    116     68      A
04   7218    306   1495   9894      w
05   1487   6571   1265  10542      y
06   2578    338  17113   1119      G
07   3247   4540   5007   4319      b
08   1609   5399   1822   8283      y
09   3161   5216   6529   2206      s
10   3275   6140   1865   5832      y
11    636    163     83  17113      T
12  17113     91    139   1277      A
13  17113     63     30     51      A
14   7903    208   1296   9210      w
15   1199   7341   1098   9771      y
16   2777    282  17113   1213      G
Binding TFs: BARHL2_full (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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