DNA Binding Motif
Accessions: | MA1006.1 (JASPAR 2024) |
Names: | ERF6 |
Organisms: | Arabidopsis thaliana |
Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
Notes: | PBM |
Length: | 10 |
Consensus: | mtGCCGGCgb |
Weblogo: | |
PSSM: | P0 A C G T 01 291 352 179 179 m 02 78 221 166 535 t 03 0 0 1000 0 G 04 0 1000 0 0 C 05 0 1000 0 0 C 06 0 0 1000 0 G 07 0 88 912 0 G 08 0 1000 0 0 C 09 159 156 530 155 g 10 172 278 257 294 b |
Type: | Heterodimer |
Binding TFs: | Q8VZ91 (AP2 domain) Q8VZ91 |
Publications: | Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.