DNA Binding Motif
| Accessions: | MA0564.1 (JASPAR 2024) |
| Names: | ABI3 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | PBM |
| Length: | 9 |
| Consensus: | ytGCATGCa |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 6 60 9 25 y 02 15 16 15 53 t 03 3 7 85 5 G 04 1 96 2 1 C 05 97 1 1 1 A 06 1 1 1 97 T 07 1 1 96 1 G 08 6 84 8 2 C 09 50 15 13 22 a |
| Type: | Heterodimer |
| Binding TFs: | Q01593 (B3 DNA binding domain) Q01593 |
| Publications: | Sasnauskas G, Manakova E, Lapėnas K, Kauneckaitė K, Siksnys V. DNA recognition by Arabidopsis transcription factors ABI3 and NGA1. FEBS J 285:4041-4059 (2018). [Pubmed] |
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