DNA Binding Motif

						

			
Accessions: MA0497.1 (JASPAR 2024)

			
Names: MEF2C
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 15
Consensus: rdkcyAAAAATAGmw
Weblogo: 
PSSM: P0      A      C      G      T
01    705    321    676    507      r
02    733    151    573    752      d
03    431    196    822    760      k
04    382   1412     78    337      c
05      0    985      0   1224      y
06   1616    256     74    263      A
07   1706     32    241    230      A
08   2107      0     87     15      A
09   2131      0      2     76      A
10   2135      0      4     70      A
11     56     62      0   2091      T
12   2177      0     32      0      A
13    389    120   1671     29      G
14    975    836    148    250      m
15   1009    450    126    624      w
Type: Heterodimer
Binding TFs: Q06413 (SRF-type transcription factor (DNA-binding and dimerisation domain), Holliday junction regulator protein family C-terminal repeat)
Q06413
Binding Sites: MA0497.1.1
MA0497.1.10
MA0497.1.11
MA0497.1.12
MA0497.1.13
MA0497.1.14
MA0497.1.15
MA0497.1.16
MA0497.1.17
MA0497.1.18
MA0497.1.19
MA0497.1.2
MA0497.1.20
MA0497.1.3
MA0497.1.4
MA0497.1.5
MA0497.1.6
MA0497.1.7
MA0497.1.8
MA0497.1.9
			
Publications: Andres V., Cervera M., Mahdavi V. Determination of the consensus binding site for MEF2 expressed in muscle and brain reveals tissue-specific sequence constraints. J. Biol. Chem. 270:23246-23249 (1995). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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