DNA Binding Motif

						

			
Accessions: MA1033.1 (JASPAR 2024)

			
Names: OJ1058_F05.8
Organisms: Oryza sativa, Oryza sativa Japonica Group
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 8
Consensus: mCACGTGk
Weblogo: 
PSSM: P0      A      C      G      T
01    661    332      3      3      m
02      3    990      3      3      C
03    990      3      3      3      A
04      3    990      3      3      C
05      3      3    990      3      G
06      3      3      3    990      T
07      3      3    990      3      G
08      5      5    495    495      k
Type: Heterodimer
Binding TFs: Q75HX9 (bZIP transcription factor, Basic region leucine zipper)
Q75HX9
			
Publications: Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.