DNA Binding Motif

Accessions: Dref (DrosophilaTF 1.1)
Names: Dref
Organisms: Drosophila melanogaster
Libraries: DrosophilaTF 1.1 1
1 Down T.A, Bergman C.M, Su J, Hubbard T.J. Large-scale discovery of promoter motifs in Drosophila melanogaster. PLoS computational biology 3:e7 (2007). [Pubmed]
Length: 8
Consensus: TATCGATA
Weblogo:
PSSM: P0 A C G T
01 0 0 0 1 T
02 1 0 0 0 A
03 0 0 0 1 T
04 0 1 0 0 C
05 0 0 1 0 G
06 1 0 0 0 A
07 0 0 0 1 T
08 1 0 0 0 A
Binding TFs: Dref (BED zinc finger)
Publications: Hirose F., Yamaguchi M., Handa H., Inomata Y., Matsukage A. Novel 8-base pair sequence (Drosophila DNA replication-related element) and specific binding factor involved in the expression of Drosophila genes for DNA polymerase alpha and proliferating cell nuclear antigen. J. Biol. Chem. 268:2092-2099 (1993). [Pubmed]

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